PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0067s0097.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 221aa    MW: 24603.3 Da    PI: 6.5316
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0067s0097.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19553153
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                         ++y+GVr++  +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  Kalax.0067s0097.1.p  5 KKYRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFQTAEEAARAYDQAAVLM 53
                         59*****999.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.82E-33564No hitNo description
PROSITE profilePS5103222.273663IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-20663IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.9E-33664IPR001471AP2/ERF domain
PfamPF008471.8E-11650IPR001471AP2/ERF domain
SMARTSM003804.2E-39669IPR001471AP2/ERF domain
PRINTSPR003674.9E-11718IPR001471AP2/ERF domain
PRINTSPR003674.9E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MVPLKKYRGV RQRQWGSWVS EIRHPLLKRR VWLGTFQTAE EAARAYDQAA VLMSGRNAKT  60
NFPEGQRPSG GDTPRLLSPA ALSEKLRKCC KDTCPSLTCL RLDDDRSSIG VWQKRAGERN  120
GSNWVMRIDL ANNNKIKKNK EEKDNVSSIS INSDKHNTDF DEYEVSASIS ENVVGLSESD  180
SSGKNGSPGD DNGDDDEEGR IALQMIEELV NWNCSTPFPN *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-16563160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007155006.17e-69hypothetical protein PHAVU_003G165000g
RefseqXP_008466408.13e-69PREDICTED: ethylene-responsive transcription factor SHINE 2-like
RefseqXP_008466409.13e-69PREDICTED: ethylene-responsive transcription factor SHINE 2-like
RefseqXP_008466410.13e-69PREDICTED: ethylene-responsive transcription factor SHINE 2-like
SwissprotQ9XI335e-60WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLV7CCJ18e-69V7CCJ1_PHAVU; Uncharacterized protein
STRINGGSMUA_Achr7P10160_0013e-67(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.16e-53ERF family protein